Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_30865 | Not Available | Positive | 7706860 - 7707900 | 39938.7 |
| Trna-val | Not Available | Not Available | Positive | 7707912 - 7707989 | Not Available |
| mfs transporter | DUE52_30875 | Not Available | Negative | 7708012 - 7709331 | 49044.5 |
| thioredoxin domain-containing protein | DUE52_30880 | Not Available | Positive | 7709501 - 7711567 | 78493.7 |
| transposase | DUE52_30885 | Not Available | Positive | 7711803 - 7711917 | 4334.3 |
| cpbp family intramembrane metalloprotease | DUE52_30890 | Not Available | Positive | 7711941 - 7712522 | 22409.9 |
| hypothetical protein | DUE52_30895 | Not Available | Positive | 7712983 - 7713165 | 6510.81 |
| hypothetical protein | DUE52_30900 | Not Available | Positive | 7713221 - 7714537 | 50672.9 |
| duf2846 domain-containing protein | DUE52_30905 | Not Available | Positive | 7714548 - 7715000 | 17306.2 |
| peptidase domain-containing abc transporter | DUE52_30915 | Not Available | Positive | 7716352 - 7718508 | 79975.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
