Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motb | DUE52_30815 | Not Available | Positive | 7690588 - 7692624 | 74647.7 |
| hypothetical protein | DUE52_30820 | Not Available | Positive | 7692678 - 7694468 | 68078.1 |
| transketolase | DUE52_30825 | Not Available | Positive | 7694469 - 7695284 | 29381.0 |
| nad-dependent epimerase/dehydratase family protein | DUE52_30830 | Not Available | Positive | 7695370 - 7697367 | 75576.8 |
| transketolase | DUE52_30835 | Not Available | Positive | 7697507 - 7698418 | 32408.6 |
| hypothetical protein | DUE52_30840 | Not Available | Positive | 7698488 - 7700188 | 64270.4 |
| hypothetical protein | DUE52_30845 | Not Available | Positive | 7700190 - 7701866 | 64211.5 |
| acyltransferase | DUE52_30850 | Not Available | Positive | 7701870 - 7703012 | 44161.6 |
| glycosyltransferase family 2 protein | DUE52_30855 | Not Available | Positive | 7703165 - 7703938 | 29349.9 |
| hypothetical protein | DUE52_30860 | Not Available | Positive | 7704123 - 7706849 | 101899.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
