Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | DUE52_30765 | Not Available | Negative | 7673618 - 7676335 | 94981.6 |
| response regulator | DUE52_30770 | Not Available | Negative | 7676587 - 7680624 | 154077.0 |
| hydrolase | DUE52_30775 | Not Available | Positive | 7680705 - 7682900 | 84195.5 |
| hypothetical protein | DUE52_30780 | Not Available | Positive | 7682967 - 7683152 | 6901.81 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DUE52_30785 | Not Available | Negative | 7683360 - 7684256 | 32500.4 |
| hypothetical protein | DUE52_30790 | Not Available | Negative | 7684338 - 7684856 | 19616.0 |
| hypothetical protein | DUE52_30795 | Not Available | Negative | 7684840 - 7686063 | 46489.2 |
| nad-dependent dna ligase liga | DUE52_30800 | Not Available | Negative | 7686093 - 7688138 | 76119.0 |
| ribulose-phosphate 3-epimerase | DUE52_30805 | Not Available | Positive | 7688319 - 7689011 | 24705.8 |
| alpha-amylase | DUE52_30810 | Not Available | Positive | 7689052 - 7690467 | 54389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
