Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DUE52_30715 | Not Available | Negative | 7654156 - 7654908 | 27115.3 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DUE52_30720 | Not Available | Negative | 7654999 - 7656969 | 72864.8 |
| succinate dehydrogenase | DUE52_30725 | Not Available | Negative | 7657014 - 7657748 | 27582.2 |
| [acyl-carrier-protein] s-malonyltransferase | DUE52_30730 | Not Available | Positive | 7658150 - 7659049 | 31918.7 |
| Trna-gln | Not Available | Not Available | Positive | 7659182 - 7659252 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 7659771 - 7659842 | Not Available |
| zinc carboxypeptidase | DUE52_30745 | Not Available | Positive | 7660033 - 7662603 | 96709.5 |
| hypothetical protein | DUE52_30750 | Not Available | Negative | 7662716 - 7665553 | 98531.7 |
| hypothetical protein | DUE52_30755 | Not Available | Negative | 7665960 - 7669400 | 120335.0 |
| response regulator | DUE52_30760 | Not Available | Negative | 7669473 - 7673522 | 153907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
