Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase family protein | DUE52_03010 | Not Available | Negative | 767815 - 768693 | 32821.0 |
| opt family oligopeptide transporter | DUE52_03015 | Not Available | Negative | 768816 - 770852 | 70945.0 |
| Trna-gly | Not Available | Not Available | Positive | 771056 - 771131 | Not Available |
| hypothetical protein | DUE52_03025 | Not Available | Positive | 771491 - 771691 | 7434.95 |
| hypothetical protein | DUE52_03030 | Not Available | Negative | 771764 - 772006 | 9310.77 |
| hypothetical protein | DUE52_03040 | Not Available | Negative | 773126 - 773437 | 12194.8 |
| sigma-70 family rna polymerase sigma factor | DUE52_03045 | Not Available | Positive | 773611 - 774219 | 23383.2 |
| fecr family protein | DUE52_03050 | Not Available | Positive | 774358 - 775440 | 41481.7 |
| susc/raga family tonb-linked outer membrane protein | DUE52_03055 | Not Available | Positive | 775615 - 779040 | 125242.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_03060 | Not Available | Positive | 779057 - 780511 | 53213.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
