Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | DUE52_30665 | Not Available | Negative | 7634006 - 7636951 | 108906.0 |
| tonb-dependent receptor | DUE52_30670 | Not Available | Positive | 7637486 - 7640617 | 113939.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_30675 | Not Available | Positive | 7640651 - 7642132 | 55712.9 |
| rna-binding protein | DUE52_30680 | Not Available | Positive | 7642424 - 7645852 | 126219.0 |
| rna-binding protein | DUE52_30685 | Not Available | Positive | 7645952 - 7649380 | 127851.0 |
| phosphatase pap2 family protein | DUE52_30690 | Not Available | Positive | 7649546 - 7650901 | 50686.2 |
| abc transporter atp-binding protein | DUE52_30695 | Not Available | Positive | 7650912 - 7651559 | 24118.2 |
| hypothetical protein | DUE52_30700 | Not Available | Positive | 7651556 - 7652650 | 41438.8 |
| tetr/acrr family transcriptional regulator | DUE52_30705 | Not Available | Negative | 7652941 - 7653609 | 24973.2 |
| glsb/yeaq/ymge family stress response membrane protein | DUE52_30710 | Not Available | Negative | 7653711 - 7653971 | 9327.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
