Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_30565 | Not Available | Negative | 7606216 - 7606518 | 10970.7 |
| tonb-dependent receptor | DUE52_30570 | Not Available | Positive | 7606600 - 7608927 | 86671.9 |
| hypothetical protein | DUE52_30575 | Not Available | Positive | 7608934 - 7610244 | 47916.7 |
| aldo/keto reductase | DUE52_30580 | Not Available | Negative | 7610299 - 7611324 | 37818.8 |
| histidine kinase | DUE52_30585 | Not Available | Positive | 7611614 - 7612966 | 51355.8 |
| response regulator | DUE52_30590 | Not Available | Positive | 7613030 - 7613404 | 13941.0 |
| adenylate/guanylate cyclase domain-containing response regulator | DUE52_30595 | Not Available | Positive | 7613401 - 7614447 | 39132.4 |
| tetr/acrr family transcriptional regulator | DUE52_30600 | Not Available | Positive | 7614707 - 7615324 | 24096.3 |
| tolc family protein | DUE52_30605 | Not Available | Positive | 7615367 - 7616752 | 51789.9 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_30610 | Not Available | Positive | 7616820 - 7617881 | 38254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
