Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase iv | DUE52_30515 | Not Available | Positive | 7589879 - 7590700 | 30771.0 |
| abc transporter atp-binding protein | DUE52_30520 | Not Available | Negative | 7590710 - 7591402 | 26075.2 |
| abc transporter permease | DUE52_30525 | Not Available | Negative | 7591539 - 7593920 | 87969.5 |
| hypothetical protein | DUE52_30530 | Not Available | Negative | 7594146 - 7595186 | 36488.8 |
| abc transporter permease | DUE52_30535 | Not Available | Negative | 7595359 - 7597785 | 90626.0 |
| abc transporter permease | DUE52_30540 | Not Available | Negative | 7597891 - 7600275 | 89650.4 |
| padr family transcriptional regulator | DUE52_30545 | Not Available | Positive | 7600613 - 7600951 | 12394.0 |
| abc transporter permease | DUE52_30550 | Not Available | Positive | 7601060 - 7603732 | 100351.0 |
| pepsy domain-containing protein | DUE52_30555 | Not Available | Negative | 7604339 - 7605931 | 59913.8 |
| hypothetical protein | DUE52_30560 | Not Available | Negative | 7605935 - 7606216 | 10404.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
