Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DUE52_30465 | Not Available | Positive | 7579335 - 7580072 | 27442.6 |
| hypothetical protein | DUE52_30470 | Not Available | Positive | 7580188 - 7582263 | 78285.7 |
| uma2 family endonuclease | DUE52_30475 | Not Available | Positive | 7582300 - 7582899 | 22579.0 |
| dihydrofolate reductase | DUE52_30480 | Not Available | Negative | 7582903 - 7583397 | 18707.2 |
| methionyl-trna formyltransferase | DUE52_30485 | Not Available | Negative | 7583401 - 7584297 | 32893.6 |
| transcription elongation factor grea | DUE52_30490 | Not Available | Positive | 7584625 - 7585098 | 17070.4 |
| hit family protein | DUE52_30495 | Not Available | Positive | 7585195 - 7585584 | 14421.7 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DUE52_30500 | Not Available | Negative | 7585586 - 7586584 | 36753.5 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_30505 | Not Available | Negative | 7586767 - 7588185 | 51325.2 |
| tolc family protein | DUE52_30510 | Not Available | Negative | 7588294 - 7589811 | 55568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
