Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phzf family phenazine biosynthesis protein | DUE52_30365 | Not Available | Negative | 7552302 - 7553114 | 29989.6 |
| hexitol phosphatase hxpb | DUE52_30370 | Not Available | Negative | 7553130 - 7553816 | 25808.9 |
| hypothetical protein | DUE52_30375 | Not Available | Negative | 7553820 - 7554107 | 10959.1 |
| s9 family peptidase | DUE52_30380 | Not Available | Positive | 7554241 - 7556706 | 92267.4 |
| phospholipase | DUE52_30385 | Not Available | Positive | 7556808 - 7558019 | 44650.0 |
| hypothetical protein | DUE52_30390 | Not Available | Positive | 7558147 - 7558476 | 11993.2 |
| 1,4-beta-xylanase | DUE52_30395 | Not Available | Negative | 7558599 - 7559735 | 43117.7 |
| galactose mutarotase | DUE52_30400 | Not Available | Negative | 7559861 - 7561039 | 42316.6 |
| fha domain-containing protein | DUE52_30405 | Not Available | Positive | 7561273 - 7562280 | 37568.4 |
| serine/threonine-protein phosphatase | DUE52_30410 | Not Available | Positive | 7562426 - 7563877 | 52148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
