Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-methyltransferase | DUE52_30315 | Not Available | Positive | 7543797 - 7544462 | 25075.3 |
| lysm peptidoglycan-binding domain-containing protein | DUE52_30320 | Not Available | Positive | 7544469 - 7546757 | 84226.7 |
| duf3109 family protein | DUE52_30325 | Not Available | Positive | 7546776 - 7547339 | 21118.3 |
| cysteine methyltransferase | DUE52_30330 | Not Available | Positive | 7547356 - 7547682 | 12097.6 |
| response regulator | DUE52_30335 | Not Available | Negative | 7547691 - 7548170 | 18081.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | DUE52_30340 | Not Available | Negative | 7548395 - 7549084 | 26314.9 |
| coproporphyrinogen iii oxidase family protein | DUE52_30345 | Not Available | Negative | 7549308 - 7550447 | 43017.0 |
| n-acetyltransferase | DUE52_30350 | Not Available | Negative | 7550529 - 7550981 | 17609.1 |
| hypothetical protein | DUE52_30355 | Not Available | Negative | 7551059 - 7551247 | 7105.65 |
| doxx family protein | DUE52_30360 | Not Available | Positive | 7551892 - 7552305 | 14889.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
