Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DUE52_30265 | Not Available | Positive | 7532296 - 7533327 | 38628.3 |
| tetratricopeptide repeat protein | DUE52_30270 | Not Available | Positive | 7533510 - 7534913 | 54147.1 |
| hypothetical protein | DUE52_30275 | Not Available | Positive | 7535014 - 7535847 | 32036.7 |
| mechanosensitive ion channel family protein | DUE52_30280 | Not Available | Negative | 7535841 - 7536719 | 32304.9 |
| glycosyltransferase family 9 protein | DUE52_30285 | Not Available | Negative | 7536781 - 7537779 | 37615.5 |
| padr family transcriptional regulator | DUE52_30290 | Not Available | Positive | 7538020 - 7538352 | 12036.5 |
| abc transporter permease | DUE52_30295 | Not Available | Positive | 7538646 - 7541078 | 90441.1 |
| hypothetical protein | DUE52_30300 | Not Available | Positive | 7541097 - 7541444 | 13252.7 |
| hypothetical protein | DUE52_30305 | Not Available | Negative | 7541637 - 7542257 | 22814.6 |
| insulinase family protein | DUE52_30310 | Not Available | Positive | 7542390 - 7543637 | 47378.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
