Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_30210 | Not Available | Positive | 7513478 - 7515883 | 89426.7 |
| hypothetical protein | DUE52_30220 | Not Available | Negative | 7517814 - 7518257 | 16900.2 |
| abc transporter permease | DUE52_30225 | Not Available | Positive | 7518331 - 7520730 | 88280.4 |
| pas domain s-box protein | DUE52_30230 | Not Available | Positive | 7520851 - 7524159 | 124107.0 |
| hybrid sensor histidine kinase/response regulator | DUE52_30235 | Not Available | Positive | 7524197 - 7525288 | 40541.7 |
| abc transporter permease | DUE52_30240 | Not Available | Negative | 7525464 - 7527830 | 87584.7 |
| transposase | DUE52_30245 | Not Available | Positive | 7528267 - 7528359 | 3668.5 |
| methionine--trna ligase | DUE52_30250 | Not Available | Negative | 7528472 - 7530553 | 78362.9 |
| atpase | DUE52_30255 | Not Available | Positive | 7530725 - 7531822 | 43175.0 |
| hypothetical protein | DUE52_30260 | Not Available | Positive | 7531797 - 7532315 | 19657.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
