Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DUE52_02960 | Not Available | Positive | 752359 - 753123 | 28190.1 |
| mfs transporter | DUE52_02965 | Not Available | Negative | 753222 - 754394 | 40555.9 |
| hypothetical protein | DUE52_02970 | Not Available | Negative | 754882 - 755226 | 12342.8 |
| cusa/czca family heavy metal efflux rnd transporter | DUE52_02975 | Not Available | Positive | 755305 - 759714 | 161700.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_02980 | Not Available | Positive | 759711 - 760949 | 45245.9 |
| hypothetical protein | DUE52_02985 | Not Available | Positive | 760961 - 761581 | 22305.8 |
| cadmium-translocating p-type atpase | DUE52_02990 | Not Available | Positive | 761587 - 763578 | 71705.5 |
| bacteriocin-protection protein | DUE52_02995 | Not Available | Positive | 763594 - 764169 | 22201.5 |
| m61 family peptidase | DUE52_03000 | Not Available | Positive | 764257 - 766098 | 69224.5 |
| fad-dependent oxidoreductase | DUE52_03005 | Not Available | Negative | 766186 - 767622 | 53950.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
