Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DUE52_30160 | Not Available | Positive | 7494520 - 7496883 | 88877.8 |
| mannonate dehydratase | DUE52_30165 | Not Available | Positive | 7497019 - 7498152 | 41742.7 |
| hypothetical protein | DUE52_30170 | Not Available | Negative | 7498260 - 7498730 | 17115.9 |
| alpha,alpha-trehalase tref | DUE52_30175 | Not Available | Positive | 7498849 - 7500423 | 60408.7 |
| acylamino acid-releasing protein | DUE52_30180 | Not Available | Negative | 7500420 - 7501724 | 48705.4 |
| padr family transcriptional regulator | DUE52_30185 | Not Available | Positive | 7501877 - 7502215 | 12667.4 |
| abc transporter permease | DUE52_30190 | Not Available | Positive | 7502550 - 7504943 | 89426.7 |
| abc transporter permease | DUE52_30195 | Not Available | Positive | 7505305 - 7507680 | 88273.9 |
| abc transporter permease | DUE52_30200 | Not Available | Positive | 7507765 - 7510410 | 98741.2 |
| abc transporter permease | DUE52_30205 | Not Available | Positive | 7510754 - 7513132 | 88564.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
