Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | DUE52_30110 | Not Available | Negative | 7476590 - 7477891 | 46579.8 |
| hypothetical protein | DUE52_30115 | Not Available | Positive | 7477890 - 7478087 | 7487.44 |
| abc transporter permease | DUE52_30120 | Not Available | Positive | 7478169 - 7480607 | 89816.9 |
| abc transporter permease | DUE52_30125 | Not Available | Positive | 7480758 - 7483136 | 87796.2 |
| abc transporter permease | DUE52_30130 | Not Available | Positive | 7483567 - 7485921 | 87764.5 |
| abc transporter permease | DUE52_30135 | Not Available | Positive | 7486026 - 7488443 | 90255.2 |
| uma2 family endonuclease | DUE52_30140 | Not Available | Negative | 7488535 - 7488978 | 16780.1 |
| hypothetical protein | DUE52_30145 | Not Available | Negative | 7489013 - 7489462 | 17007.3 |
| abc transporter permease | DUE52_30150 | Not Available | Positive | 7489517 - 7491898 | 89397.5 |
| abc transporter permease | DUE52_30155 | Not Available | Positive | 7492024 - 7494432 | 89660.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
