Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | DUE52_30060 | Not Available | Negative | 7464840 - 7465298 | 17237.5 |
| abc transporter permease | DUE52_30065 | Not Available | Positive | 7465337 - 7467691 | 86700.9 |
| hypothetical protein | DUE52_30070 | Not Available | Positive | 7467763 - 7468371 | 22246.2 |
| hypothetical protein | DUE52_30075 | Not Available | Positive | 7468543 - 7471008 | 91978.4 |
| uma2 family endonuclease | DUE52_30080 | Not Available | Negative | 7471430 - 7471915 | 18426.2 |
| hydroxyethylthiazole kinase | DUE52_30085 | Not Available | Positive | 7472219 - 7473007 | 26877.7 |
| thiamine phosphate synthase | DUE52_30090 | Not Available | Positive | 7473111 - 7473737 | 22690.4 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DUE52_30095 | Not Available | Positive | 7473734 - 7474555 | 29190.3 |
| thiaminase ii | DUE52_30100 | Not Available | Positive | 7474552 - 7475202 | 24713.0 |
| sodium:proton antiporter | DUE52_30105 | Not Available | Negative | 7475204 - 7476499 | 46952.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
