Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DUE52_29960 | Not Available | Negative | 7435791 - 7437563 | 65892.8 |
| sodium:proton antiporter | DUE52_29965 | Not Available | Negative | 7437705 - 7439954 | 81865.9 |
| gfo/idh/moca family oxidoreductase | DUE52_29970 | Not Available | Positive | 7440062 - 7441081 | 36316.6 |
| gfo/idh/moca family oxidoreductase | DUE52_29975 | Not Available | Positive | 7441145 - 7442497 | 50155.6 |
| glucose/galactose mfs transporter | DUE52_29980 | Not Available | Positive | 7442548 - 7443870 | 48067.4 |
| atp-binding protein | DUE52_29985 | Not Available | Positive | 7443953 - 7445269 | 50288.5 |
| rlob domain-containing protein | DUE52_29990 | Not Available | Positive | 7445250 - 7445612 | 13673.2 |
| hypothetical protein | DUE52_29995 | Not Available | Positive | 7445579 - 7445950 | 13869.5 |
| hypothetical protein | DUE52_30000 | Not Available | Positive | 7446219 - 7447484 | 45210.1 |
| cupin domain-containing protein | DUE52_30005 | Not Available | Positive | 7447522 - 7448079 | 20781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
