Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DUE52_29910 | Not Available | Positive | 7427125 - 7428042 | 35095.1 |
| hypothetical protein | DUE52_29915 | Not Available | Positive | 7428127 - 7429263 | 43237.5 |
| gfo/idh/moca family oxidoreductase | DUE52_29920 | Not Available | Positive | 7429194 - 7430216 | 37147.7 |
| anti-anti-sigma factor | DUE52_29925 | Not Available | Negative | 7430487 - 7430894 | 15200.6 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DUE52_29930 | Not Available | Negative | 7430916 - 7431875 | 36580.4 |
| acetyl-coa c-acyltransferase | DUE52_29935 | Not Available | Negative | 7431991 - 7433166 | 40893.3 |
| tetratricopeptide repeat-containing protein | DUE52_29940 | Not Available | Negative | 7433191 - 7433898 | 26761.9 |
| vwa domain-containing protein | DUE52_29945 | Not Available | Negative | 7433955 - 7434917 | 35764.6 |
| Trna-ser | Not Available | Not Available | Positive | 7435124 - 7435213 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 7435294 - 7435367 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
