Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vut family protein | DUE52_29860 | Not Available | Negative | 7407724 - 7408512 | 29125.0 |
| gdsl family lipase | DUE52_29865 | Not Available | Positive | 7408780 - 7410009 | 45104.7 |
| dehydrogenase | DUE52_29870 | Not Available | Positive | 7410020 - 7413490 | 126508.0 |
| pyridoxal phosphate-dependent aminotransferase | DUE52_29875 | Not Available | Negative | 7413619 - 7414830 | 45080.3 |
| glutamate synthase subunit beta | DUE52_29880 | Not Available | Negative | 7415040 - 7416527 | 54302.0 |
| duf29 domain-containing protein | DUE52_29885 | Not Available | Negative | 7416533 - 7416958 | 16441.4 |
| glutamate synthase large subunit | DUE52_29890 | Not Available | Negative | 7417005 - 7421576 | 169291.0 |
| fad-binding oxidoreductase | DUE52_29895 | Not Available | Positive | 7422308 - 7422751 | 17020.5 |
| t9ss c-terminal target domain-containing protein | DUE52_29900 | Not Available | Positive | 7422782 - 7426033 | 118261.0 |
| ribonuclease z | DUE52_29905 | Not Available | Negative | 7426109 - 7427020 | 34552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
