Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_29710 | Not Available | Negative | 7368473 - 7369063 | 22374.4 |
| susc/raga family tonb-linked outer membrane protein | DUE52_29715 | Not Available | Positive | 7369745 - 7373254 | 126620.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_29720 | Not Available | Positive | 7373265 - 7374884 | 58964.1 |
| carboxymuconolactone decarboxylase family protein | DUE52_29725 | Not Available | Positive | 7375021 - 7375365 | 12208.5 |
| hypothetical protein | DUE52_29730 | Not Available | Negative | 7375510 - 7375935 | 16211.2 |
| hypothetical protein | DUE52_29735 | Not Available | Negative | 7376071 - 7377075 | 37926.7 |
| Trna-arg | Not Available | Not Available | Positive | 7377162 - 7377233 | Not Available |
| gtpase hflx | DUE52_29745 | Not Available | Negative | 7377310 - 7378578 | 48365.2 |
| mate family efflux transporter | DUE52_29750 | Not Available | Positive | 7379014 - 7380399 | 49207.0 |
| hypothetical protein | DUE52_29755 | Not Available | Negative | 7380458 - 7380709 | 9476.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
