Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactonase family protein | DUE52_02910 | Not Available | Positive | 741914 - 743038 | 40382.1 |
| methyltransferase domain-containing protein | DUE52_02915 | Not Available | Negative | 743118 - 744020 | 33884.8 |
| hypothetical protein | DUE52_02920 | Not Available | Negative | 744078 - 744269 | 6835.17 |
| doxx family protein | DUE52_02925 | Not Available | Positive | 744268 - 744684 | 15263.0 |
| mfs transporter | DUE52_02930 | Not Available | Positive | 744716 - 746056 | 47866.6 |
| hypothetical protein | DUE52_02935 | Not Available | Negative | 746066 - 748603 | 95112.9 |
| hypothetical protein | DUE52_02940 | Not Available | Negative | 748593 - 749360 | 29265.7 |
| hypothetical protein | DUE52_02945 | Not Available | Negative | 749662 - 750054 | 14115.3 |
| alpha/beta hydrolase | DUE52_02950 | Not Available | Positive | 750330 - 750869 | 19675.1 |
| chitinase | DUE52_02955 | Not Available | Positive | 750957 - 752114 | 43212.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
