Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | DUE52_29605 | Not Available | Positive | 7340732 - 7347526 | 234104.0 |
| type ix secretion system membrane protein porp/sprf | DUE52_29610 | Not Available | Positive | 7347532 - 7348521 | 36644.3 |
| flagellar motor protein motb | DUE52_29615 | Not Available | Positive | 7348557 - 7350926 | 88600.4 |
| type ix secretion system membrane protein porp/sprf | DUE52_29620 | Not Available | Positive | 7350966 - 7351889 | 33650.8 |
| glycosyltransferase family 2 protein | DUE52_29625 | Not Available | Positive | 7351900 - 7352772 | 34128.6 |
| low affinity iron permease family protein | DUE52_29630 | Not Available | Negative | 7352780 - 7353259 | 17961.7 |
| abc transporter atp-binding protein | DUE52_29635 | Not Available | Positive | 7353422 - 7355242 | 67591.5 |
| response regulator | DUE52_29640 | Not Available | Negative | 7355279 - 7357243 | 73643.7 |
| hypothetical protein | DUE52_29645 | Not Available | Negative | 7357374 - 7357763 | 14395.5 |
| dj-1/pfpi family protein | DUE52_29650 | Not Available | Positive | 7358000 - 7358605 | 21820.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
