Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_29500 | Not Available | Negative | 7315551 - 7318634 | 110782.0 |
| laci family transcriptional regulator | DUE52_29505 | Not Available | Positive | 7319029 - 7320060 | 37858.7 |
| hypothetical protein | DUE52_29510 | Not Available | Negative | 7320065 - 7324618 | 165867.0 |
| hypothetical protein | DUE52_29515 | Not Available | Negative | 7324630 - 7325133 | 19553.2 |
| t9ss c-terminal target domain-containing protein | DUE52_29520 | Not Available | Negative | 7325145 - 7327562 | 86780.2 |
| hypothetical protein | DUE52_29525 | Not Available | Negative | 7327724 - 7328014 | 11034.0 |
| hypothetical protein | DUE52_29530 | Not Available | Negative | 7328017 - 7328541 | 19292.0 |
| hypothetical protein | DUE52_29535 | Not Available | Negative | 7328684 - 7329019 | 13103.5 |
| hypothetical protein | DUE52_29540 | Not Available | Negative | 7329006 - 7329341 | 12441.1 |
| hypothetical protein | DUE52_29545 | Not Available | Negative | 7329716 - 7330183 | 17747.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
