Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DUE52_29400 | Not Available | Positive | 7287879 - 7288937 | 39485.9 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_29405 | Not Available | Positive | 7289094 - 7289879 | 27169.8 |
| mfs transporter | DUE52_29410 | Not Available | Positive | 7289998 - 7291320 | 48317.4 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_29415 | Not Available | Positive | 7291387 - 7292157 | 26875.3 |
| lipase family protein | DUE52_29420 | Not Available | Positive | 7292238 - 7293323 | 40785.4 |
| class a beta-lactamase-related serine hydrolase | DUE52_29425 | Not Available | Positive | 7293607 - 7295277 | 62042.1 |
| transcriptional regulator | DUE52_29430 | Not Available | Negative | 7295302 - 7295667 | 13761.8 |
| pirin family protein | DUE52_29435 | Not Available | Positive | 7295775 - 7296665 | 32657.1 |
| ion transporter | DUE52_29440 | Not Available | Positive | 7296828 - 7297664 | 30537.1 |
| energy transducer tonb | DUE52_29445 | Not Available | Negative | 7297675 - 7298103 | 15691.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
