Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_29350 | Not Available | Negative | 7276042 - 7276389 | 13064.1 |
| aminotransferase class v-fold plp-dependent enzyme | DUE52_29355 | Not Available | Positive | 7276698 - 7278011 | 48820.9 |
| hypothetical protein | DUE52_29360 | Not Available | Positive | 7278065 - 7278442 | 14806.0 |
| sensor protein lyts | DUE52_29365 | Not Available | Positive | 7278555 - 7280090 | 59086.1 |
| dna-binding response regulator | DUE52_29370 | Not Available | Positive | 7280091 - 7280780 | 26325.0 |
| osmc family peroxiredoxin | DUE52_29375 | Not Available | Negative | 7280941 - 7281357 | 15167.2 |
| hypothetical protein | DUE52_29380 | Not Available | Positive | 7281550 - 7282302 | 27676.3 |
| lipoyl synthase | DUE52_29385 | Not Available | Positive | 7282450 - 7283328 | 33437.4 |
| lycopene cyclase | DUE52_29390 | Not Available | Positive | 7283438 - 7284598 | 45315.2 |
| dehydrogenase | DUE52_29395 | Not Available | Positive | 7285290 - 7287827 | 93957.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
