Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | DUE52_29300 | Not Available | Positive | 7263461 - 7264924 | 51559.8 |
| dna-binding response regulator | DUE52_29305 | Not Available | Positive | 7265535 - 7266317 | 30346.5 |
| m23 family peptidase | DUE52_29310 | Not Available | Positive | 7266369 - 7267706 | 48137.1 |
| duf4136 domain-containing protein | DUE52_29315 | Not Available | Negative | 7267813 - 7268388 | 22012.8 |
| polyisoprenoid-binding protein | DUE52_29320 | Not Available | Negative | 7268671 - 7269216 | 19595.7 |
| hypothetical protein | DUE52_29325 | Not Available | Negative | 7269379 - 7269615 | 8808.54 |
| atp synthase f1 subunit gamma | DUE52_29330 | Not Available | Negative | 7269850 - 7270737 | 32612.4 |
| f0f1 atp synthase subunit alpha | DUE52_29335 | Not Available | Negative | 7270849 - 7272426 | 56826.7 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DUE52_29340 | Not Available | Positive | 7272882 - 7273631 | 26526.1 |
| tail-specific protease | DUE52_29345 | Not Available | Positive | 7273812 - 7275893 | 77744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
