Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_29250 | Not Available | Positive | 7248448 - 7248912 | 17395.8 |
| hypothetical protein | DUE52_29255 | Not Available | Positive | 7248925 - 7249410 | 18703.3 |
| sialidase | DUE52_29260 | Not Available | Negative | 7249444 - 7250493 | 38040.4 |
| coce/nond family hydrolase | DUE52_29265 | Not Available | Negative | 7250723 - 7252636 | 72020.9 |
| hypothetical protein | DUE52_29270 | Not Available | Negative | 7252655 - 7254325 | 62863.7 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_29275 | Not Available | Negative | 7254306 - 7255688 | 50985.6 |
| susc/raga family tonb-linked outer membrane protein | DUE52_29280 | Not Available | Negative | 7255784 - 7258816 | 109290.0 |
| hypothetical protein | DUE52_29285 | Not Available | Negative | 7259192 - 7259761 | 22361.6 |
| beta-n-acetylhexosaminidase | DUE52_29290 | Not Available | Positive | 7259850 - 7262204 | 87944.2 |
| cytochrome c | DUE52_29295 | Not Available | Negative | 7262213 - 7263187 | 35471.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
