Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DUE52_02860 | Not Available | Negative | 729334 - 730017 | 24896.1 |
| marr family transcriptional regulator | DUE52_02865 | Not Available | Positive | 730216 - 730923 | 26679.8 |
| duf4345 domain-containing protein | DUE52_02870 | Not Available | Positive | 731015 - 731443 | 15398.0 |
| fatty acid desaturase | DUE52_02875 | Not Available | Negative | 731560 - 732627 | 40919.2 |
| tonb-dependent receptor | DUE52_02880 | Not Available | Negative | 732710 - 735181 | 91879.1 |
| alpha/beta hydrolase | DUE52_02885 | Not Available | Negative | 735460 - 736368 | 32893.8 |
| hypothetical protein | DUE52_02890 | Not Available | Negative | 736381 - 737331 | 35207.7 |
| s9 family peptidase | DUE52_02895 | Not Available | Negative | 737485 - 739548 | 77243.3 |
| chloride channel protein | DUE52_02900 | Not Available | Positive | 739790 - 741118 | 47319.8 |
| polyisoprenoid-binding protein | DUE52_02905 | Not Available | Positive | 741248 - 741817 | 20511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
