Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vcbs repeat-containing protein | DUE52_29045 | Not Available | Negative | 7207293 - 7208501 | 45028.7 |
| vcbs repeat-containing protein | DUE52_29050 | Not Available | Negative | 7208643 - 7209779 | 42020.1 |
| class i sam-dependent rrna methyltransferase | DUE52_29055 | Not Available | Negative | 7209810 - 7210997 | 44147.5 |
| dabb family protein | DUE52_29065 | Not Available | Positive | 7212189 - 7212590 | 15335.3 |
| 30s ribosomal protein s20 | DUE52_29070 | Not Available | Positive | 7212697 - 7212960 | 9847.27 |
| dna repair protein radc | DUE52_29075 | Not Available | Positive | 7213078 - 7213773 | 25696.1 |
| hypothetical protein | DUE52_29080 | Not Available | Negative | 7213862 - 7214302 | 15885.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | DUE52_29085 | Not Available | Negative | 7214743 - 7215867 | 42285.7 |
| nyn domain-containing protein | DUE52_29090 | Not Available | Positive | 7216121 - 7217080 | 36742.2 |
| anthranilate synthase component i family protein | DUE52_29095 | Not Available | Positive | 7217080 - 7218426 | 50961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
