Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | DUE52_28995 | Not Available | Negative | 7193589 - 7196783 | 116571.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_29000 | Not Available | Negative | 7196797 - 7197963 | 41697.9 |
| tolc family protein | DUE52_29005 | Not Available | Negative | 7198006 - 7199355 | 51004.9 |
| shikimate kinase | DUE52_29010 | Not Available | Negative | 7199487 - 7199996 | 19435.4 |
| doxx family protein | DUE52_29015 | Not Available | Negative | 7200022 - 7201170 | 43111.1 |
| duf1599 domain-containing protein | DUE52_29020 | Not Available | Negative | 7201167 - 7201724 | 21492.3 |
| dihydropteroate synthase | DUE52_29025 | Not Available | Positive | 7201815 - 7202663 | 30807.4 |
| tigr00159 family protein | DUE52_29030 | Not Available | Positive | 7202709 - 7203539 | 30777.8 |
| hypothetical protein | DUE52_29035 | Not Available | Negative | 7203998 - 7205545 | 57310.2 |
| udp-galactopyranose mutase | DUE52_29040 | Not Available | Negative | 7205720 - 7206862 | 43887.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
