Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_28945 | Not Available | Negative | 7178358 - 7181996 | 136345.0 |
| hypothetical protein | DUE52_28950 | Not Available | Negative | 7182017 - 7182871 | 31322.4 |
| hd domain-containing protein | DUE52_28955 | Not Available | Negative | 7182888 - 7184093 | 45969.9 |
| carboxypeptidase-like regulatory domain-containing protein | DUE52_28960 | Not Available | Positive | 7184329 - 7186857 | 95342.7 |
| fkbp-type peptidylprolyl isomerase | DUE52_28965 | Not Available | Positive | 7186905 - 7187288 | 13539.2 |
| peptidylprolyl isomerase | DUE52_28970 | Not Available | Negative | 7187404 - 7187853 | 16057.0 |
| proline--trna ligase | DUE52_28975 | Not Available | Negative | 7188018 - 7189490 | 55880.6 |
| hypothetical protein | DUE52_28980 | Not Available | Positive | 7189681 - 7191003 | 47277.8 |
| hypothetical protein | DUE52_28985 | Not Available | Positive | 7191226 - 7192773 | 56497.6 |
| rna polymerase subunit sigma-70 | DUE52_28990 | Not Available | Positive | 7193027 - 7193587 | 21452.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
