Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | DUE52_28895 | Not Available | Positive | 7166084 - 7167673 | 57687.3 |
| coa pyrophosphatase | DUE52_28900 | Not Available | Positive | 7167666 - 7168304 | 23952.2 |
| dna gyrase/topoisomerase iv subunit a | DUE52_28905 | Not Available | Positive | 7168646 - 7171306 | 100359.0 |
| sana protein | DUE52_28910 | Not Available | Positive | 7171431 - 7172015 | 22259.8 |
| hypothetical protein | DUE52_28915 | Not Available | Positive | 7172148 - 7173260 | 41626.4 |
| duf2490 domain-containing protein | DUE52_28920 | Not Available | Negative | 7173255 - 7173944 | 26247.4 |
| duf4956 domain-containing protein | DUE52_28925 | Not Available | Negative | 7173961 - 7174623 | 25025.8 |
| vtc domain-containing protein | DUE52_28930 | Not Available | Negative | 7174589 - 7175395 | 31214.9 |
| spore coat protein coth | DUE52_28935 | Not Available | Negative | 7175404 - 7176819 | 51979.8 |
| adenylate/guanylate cyclase domain-containing protein | DUE52_28940 | Not Available | Positive | 7177027 - 7178355 | 49571.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
