Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | DUE52_28845 | Not Available | Positive | 7147797 - 7153295 | 200267.0 |
| non-ribosomal peptide synthetase | DUE52_28850 | Not Available | Positive | 7153301 - 7157329 | 151512.0 |
| hypothetical protein | DUE52_28855 | Not Available | Positive | 7157363 - 7157578 | 8082.72 |
| mbl fold metallo-hydrolase | DUE52_28860 | Not Available | Negative | 7157618 - 7158331 | 26722.0 |
| osmc family peroxiredoxin | DUE52_28865 | Not Available | Positive | 7158544 - 7158966 | 14635.0 |
| hypothetical protein | DUE52_28870 | Not Available | Positive | 7159192 - 7160034 | 31923.4 |
| hypothetical protein | DUE52_28875 | Not Available | Positive | 7160225 - 7160683 | 16862.9 |
| xre family transcriptional regulator | DUE52_28880 | Not Available | Positive | 7160802 - 7162286 | 56973.8 |
| acyl-coa dehydrogenase | DUE52_28885 | Not Available | Negative | 7162350 - 7163540 | 43846.9 |
| alpha-l-fucosidase | DUE52_28890 | Not Available | Negative | 7163641 - 7165719 | 76713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
