Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DUE52_28795 | Not Available | Positive | 7135109 - 7136101 | 38254.7 |
| tatd family deoxyribonuclease | DUE52_28800 | Not Available | Positive | 7136098 - 7136877 | 28914.8 |
| asparaginase | DUE52_28805 | Not Available | Positive | 7136879 - 7137946 | 39473.7 |
| Trna-ser | Not Available | Not Available | Positive | 7138008 - 7138098 | Not Available |
| hypothetical protein | DUE52_28815 | Not Available | Positive | 7138557 - 7139462 | 34240.9 |
| peptidoglycan-binding protein | DUE52_28820 | Not Available | Positive | 7139961 - 7140743 | 28388.4 |
| amidohydrolase | DUE52_28825 | Not Available | Negative | 7140764 - 7142206 | 51267.6 |
| peptidase | DUE52_28830 | Not Available | Positive | 7142597 - 7145440 | 106006.0 |
| chromosome partitioning protein para | DUE52_28835 | Not Available | Positive | 7145927 - 7146592 | 24069.7 |
| hypothetical protein | DUE52_28840 | Not Available | Positive | 7146600 - 7146962 | 14005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
