Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_28745 | Not Available | Positive | 7129060 - 7129431 | 13422.3 |
| hypothetical protein | DUE52_28750 | Not Available | Positive | 7129563 - 7130186 | 23955.9 |
| hypothetical protein | DUE52_28755 | Not Available | Positive | 7130197 - 7130643 | 16889.3 |
| transposase | DUE52_28760 | Not Available | Negative | 7130751 - 7130844 | 3698.53 |
| transposase | DUE52_28765 | Not Available | Positive | 7130845 - 7130938 | 3668.5 |
| type vi secretion protein | DUE52_28770 | Not Available | Negative | 7131009 - 7131302 | 9194.44 |
| crossover junction endodeoxyribonuclease ruvc | DUE52_28775 | Not Available | Negative | 7131673 - 7132272 | 21831.6 |
| upf0104 family protein | DUE52_28780 | Not Available | Positive | 7132305 - 7133291 | 37005.9 |
| glycosyltransferase | DUE52_28785 | Not Available | Positive | 7133298 - 7134431 | 41587.6 |
| polysaccharide deacetylase family protein | DUE52_28790 | Not Available | Positive | 7134465 - 7135112 | 25068.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
