Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3037 domain-containing protein | DUE52_28690 | Not Available | Positive | 7120947 - 7121327 | 14398.5 |
| hypothetical protein | DUE52_28695 | Not Available | Negative | 7121368 - 7121592 | 8222.1 |
| hypothetical protein | DUE52_28700 | Not Available | Negative | 7121576 - 7121809 | 8502.77 |
| hypothetical protein | DUE52_28705 | Not Available | Negative | 7121917 - 7122144 | 8572.08 |
| Trna-arg | Not Available | Not Available | Positive | 7122233 - 7122309 | Not Available |
| t9ss c-terminal target domain-containing protein | DUE52_28720 | Not Available | Positive | 7122969 - 7125434 | 87673.9 |
| duf1206 domain-containing protein | DUE52_28725 | Not Available | Negative | 7125559 - 7126404 | 30777.8 |
| hypothetical protein | DUE52_28730 | Not Available | Positive | 7126980 - 7127315 | 12216.0 |
| crp/fnr family transcriptional regulator | DUE52_28735 | Not Available | Positive | 7127543 - 7128121 | 22327.0 |
| hypothetical protein | DUE52_28740 | Not Available | Positive | 7128199 - 7128816 | 24015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
