Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | DUE52_28535 | Not Available | Positive | 7086696 - 7087265 | 21211.7 |
| hypothetical protein | DUE52_28540 | Not Available | Negative | 7087262 - 7087597 | 13347.6 |
| osmc family peroxiredoxin | DUE52_28545 | Not Available | Positive | 7087733 - 7088149 | 15175.4 |
| thymidylate synthase | DUE52_28550 | Not Available | Positive | 7088312 - 7089106 | 30442.5 |
| hypothetical protein | DUE52_28555 | Not Available | Negative | 7089110 - 7089394 | 11368.9 |
| dna polymerase/3'-5' exonuclease polx | DUE52_28560 | Not Available | Positive | 7089538 - 7091232 | 63148.0 |
| tonb-dependent receptor | DUE52_28565 | Not Available | Positive | 7091347 - 7093749 | 89842.9 |
| duf4249 domain-containing protein | DUE52_28570 | Not Available | Positive | 7093756 - 7094853 | 40130.4 |
| hypothetical protein | DUE52_28575 | Not Available | Positive | 7095236 - 7095700 | 18325.6 |
| glycosyltransferase family 9 protein | DUE52_28580 | Not Available | Positive | 7095864 - 7096886 | 38970.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
