Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0175 family protein | DUE52_28485 | Not Available | Positive | 7077782 - 7077991 | 7478.0 |
| duf3368 domain-containing protein | DUE52_28490 | Not Available | Positive | 7077997 - 7078452 | 16684.9 |
| gfo/idh/moca family oxidoreductase | DUE52_28495 | Not Available | Positive | 7078449 - 7079558 | 41062.8 |
| phosphoadenylyl-sulfate reductase | DUE52_28500 | Not Available | Positive | 7079625 - 7080338 | 27417.4 |
| sulfate adenylyltransferase subunit cysd | DUE52_28505 | Not Available | Positive | 7080444 - 7081355 | 34782.1 |
| duf4160 domain-containing protein | DUE52_28510 | Not Available | Positive | 7081388 - 7081624 | 8808.63 |
| hypothetical protein | DUE52_28515 | Not Available | Positive | 7081600 - 7082109 | 19188.4 |
| gtp-binding protein | DUE52_28520 | Not Available | Positive | 7082110 - 7083363 | 46206.2 |
| hepn domain-containing protein | DUE52_28525 | Not Available | Positive | 7083577 - 7085721 | 79777.6 |
| uroporphyrinogen-iii c-methyltransferase | DUE52_28530 | Not Available | Positive | 7085822 - 7086571 | 26795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
