Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | DUE52_28435 | Not Available | Positive | 7065469 - 7066086 | 23696.4 |
| aaa family atpase | DUE52_28440 | Not Available | Negative | 7066075 - 7066593 | 19669.5 |
| nicotinamide riboside transporter pnuc | DUE52_28445 | Not Available | Negative | 7066590 - 7067258 | 25889.6 |
| exodeoxyribonuclease iii | DUE52_28450 | Not Available | Negative | 7067255 - 7068058 | 30590.8 |
| leucine--trna ligase | DUE52_28455 | Not Available | Negative | 7068204 - 7071095 | 109810.0 |
| hypothetical protein | DUE52_28460 | Not Available | Negative | 7071239 - 7072720 | 54432.1 |
| hypothetical protein | DUE52_28465 | Not Available | Negative | 7072792 - 7073865 | 39530.6 |
| s8 family peptidase | DUE52_28470 | Not Available | Positive | 7074073 - 7075248 | 40464.4 |
| sulfite exporter taue/safe family protein | DUE52_28475 | Not Available | Positive | 7075380 - 7076438 | 37497.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DUE52_28480 | Not Available | Positive | 7076533 - 7077726 | 43627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
