Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DUE52_28385 | Not Available | Positive | 7054011 - 7055606 | 60896.9 |
| sialate o-acetylesterase | DUE52_28390 | Not Available | Positive | 7055710 - 7057641 | 71119.8 |
| nudix domain-containing protein | DUE52_28395 | Not Available | Positive | 7057797 - 7058483 | 26565.0 |
| xylose isomerase | DUE52_28400 | Not Available | Positive | 7058680 - 7060011 | 49502.1 |
| transketolase | DUE52_28405 | Not Available | Positive | 7060098 - 7060955 | 30784.6 |
| transketolase family protein | DUE52_28410 | Not Available | Positive | 7060966 - 7061922 | 33817.9 |
| glycerophosphodiester phosphodiesterase | DUE52_28415 | Not Available | Negative | 7061987 - 7062853 | 32071.9 |
| class ii fumarate hydratase | DUE52_28420 | Not Available | Negative | 7062921 - 7064324 | 50870.0 |
| duf2384 domain-containing protein | DUE52_28425 | Not Available | Positive | 7064482 - 7064922 | 16617.3 |
| res domain-containing protein | DUE52_28430 | Not Available | Positive | 7065013 - 7065462 | 17343.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
