Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DUE52_28335 | Not Available | Negative | 7044595 - 7044996 | 15053.4 |
| dihydroxy-acid dehydratase | DUE52_28340 | Not Available | Positive | 7045167 - 7046873 | 61638.5 |
| sugar phosphate isomerase/epimerase | DUE52_28345 | Not Available | Negative | 7046996 - 7047931 | 33883.2 |
| duf4126 domain-containing protein | DUE52_28350 | Not Available | Positive | 7048036 - 7048605 | 19894.9 |
| peptidase m19 | DUE52_28355 | Not Available | Negative | 7048617 - 7049696 | 39838.1 |
| membrane or secreted protein | DUE52_28360 | Not Available | Negative | 7049752 - 7050468 | 26488.2 |
| n-acetyltransferase | DUE52_28365 | Not Available | Positive | 7050756 - 7051064 | 11790.0 |
| sterol desaturase family protein | DUE52_28370 | Not Available | Negative | 7051087 - 7051965 | 34178.7 |
| porin family protein | DUE52_28375 | Not Available | Positive | 7052198 - 7052755 | 19528.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DUE52_28380 | Not Available | Positive | 7052879 - 7053910 | 37455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
