Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | DUE52_28285 | Not Available | Negative | 7031685 - 7033184 | 55913.7 |
| atp-dependent helicase | DUE52_28290 | Not Available | Negative | 7033539 - 7034792 | 46044.9 |
| class c beta-lactamase-related serine hydrolase | DUE52_28295 | Not Available | Positive | 7034987 - 7036144 | 43420.4 |
| dinb family protein | DUE52_28300 | Not Available | Positive | 7036179 - 7036706 | 19592.4 |
| glyoxalase | DUE52_28305 | Not Available | Positive | 7036729 - 7037214 | 18034.3 |
| nadh:flavin oxidoreductase/nadh oxidase | DUE52_28310 | Not Available | Negative | 7037292 - 7038356 | 38694.0 |
| hypothetical protein | DUE52_28315 | Not Available | Negative | 7038534 - 7038869 | 13445.2 |
| peptidase m48 | DUE52_28320 | Not Available | Negative | 7039279 - 7040748 | 54817.5 |
| duf4369 domain-containing protein | DUE52_28325 | Not Available | Positive | 7040994 - 7042139 | 42386.8 |
| pas domain s-box protein | DUE52_28330 | Not Available | Negative | 7042163 - 7044598 | 92099.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
