Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 7019254 - 7019338 | Not Available |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DUE52_28240 | Not Available | Positive | 7019598 - 7021844 | 85601.0 |
| transcriptional repressor | DUE52_28245 | Not Available | Positive | 7021975 - 7022493 | 20089.9 |
| adenylosuccinate synthase | DUE52_28250 | Not Available | Positive | 7022587 - 7023870 | 47252.8 |
| molybdopterin containing oxidoreductase | DUE52_28255 | Not Available | Positive | 7023978 - 7025210 | 45393.9 |
| dienelactone hydrolase family protein | DUE52_28260 | Not Available | Negative | 7025573 - 7026430 | 31186.3 |
| nudix domain-containing protein | DUE52_28265 | Not Available | Negative | 7026472 - 7027164 | 27053.2 |
| sodium transporter | DUE52_28270 | Not Available | Negative | 7027401 - 7029056 | 60375.9 |
| l-ribulose-5-phosphate 4-epimerase | DUE52_28275 | Not Available | Negative | 7029164 - 7029862 | 25864.8 |
| ribulokinase | DUE52_28280 | Not Available | Negative | 7029977 - 7031617 | 59057.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
