Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DUE52_28185 | Not Available | Negative | 7009126 - 7010253 | 40845.0 |
| hypothetical protein | DUE52_28190 | Not Available | Negative | 7010401 - 7011558 | 43464.5 |
| alpha/beta hydrolase | DUE52_28195 | Not Available | Negative | 7011774 - 7012502 | 26267.3 |
| hypothetical protein | DUE52_28200 | Not Available | Negative | 7012635 - 7013282 | 22790.4 |
| hypothetical protein | DUE52_28205 | Not Available | Negative | 7013507 - 7013689 | 6075.97 |
| atp-dependent clp protease atp-binding subunit clpx | DUE52_28210 | Not Available | Negative | 7014287 - 7015522 | 46116.8 |
| cytochrome c | DUE52_28215 | Not Available | Negative | 7015763 - 7016227 | 17666.1 |
| atp-dependent clp protease proteolytic subunit | DUE52_28220 | Not Available | Negative | 7016331 - 7017005 | 24953.0 |
| xre family transcriptional regulator | DUE52_28225 | Not Available | Positive | 7017234 - 7017632 | 14963.0 |
| trigger factor | DUE52_28230 | Not Available | Negative | 7017791 - 7019149 | 51179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
