Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_02760 | Not Available | Positive | 702445 - 703479 | 38773.6 |
| dihydrodipicolinate synthase family protein | DUE52_02765 | Not Available | Positive | 703486 - 704451 | 36125.5 |
| hypothetical protein | DUE52_02770 | Not Available | Positive | 704448 - 705386 | 34173.3 |
| gfo/idh/moca family oxidoreductase | DUE52_02775 | Not Available | Positive | 705440 - 706363 | 33971.9 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_02780 | Not Available | Positive | 706365 - 707156 | 27949.4 |
| peptidase m28 | DUE52_02785 | Not Available | Positive | 707218 - 708903 | 60804.3 |
| abc transporter permease subunit | DUE52_02790 | Not Available | Negative | 709369 - 710928 | 56750.1 |
| atp-binding cassette domain-containing protein | DUE52_02795 | Not Available | Negative | 710941 - 711897 | 35777.4 |
| sugar o-acetyltransferase | DUE52_02800 | Not Available | Negative | 711919 - 712479 | 20493.7 |
| hypothetical protein | DUE52_02805 | Not Available | Positive | 712707 - 714623 | 72359.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
