Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 family rnd transporter | DUE52_28035 | Not Available | Negative | 6970089 - 6973277 | 116161.0 |
| efflux rnd transporter periplasmic adaptor subunit | DUE52_28040 | Not Available | Negative | 6973385 - 6974536 | 42090.4 |
| hypothetical protein | DUE52_28045 | Not Available | Negative | 6974694 - 6975038 | 12830.2 |
| duf1697 domain-containing protein | DUE52_28050 | Not Available | Positive | 6975389 - 6975946 | 20622.8 |
| fatty acid--coa ligase | DUE52_28055 | Not Available | Negative | 6975981 - 6977654 | 62487.2 |
| nupc/nupg family nucleoside cnt transporter | DUE52_28060 | Not Available | Negative | 6977750 - 6978991 | 44236.5 |
| hypothetical protein | DUE52_28065 | Not Available | Positive | 6979298 - 6980875 | 57580.7 |
| polyphosphate kinase 1 | DUE52_28070 | Not Available | Negative | 6980993 - 6983314 | 89746.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DUE52_28075 | Not Available | Negative | 6984392 - 6986392 | 74491.8 |
| hypothetical protein | DUE52_28080 | Not Available | Positive | 6986659 - 6987279 | 22775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
