Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | DUE52_27885 | Not Available | Negative | 6937037 - 6939991 | 109443.0 |
| hypothetical protein | DUE52_27890 | Not Available | Positive | 6940159 - 6940341 | 6272.93 |
| duf1648 domain-containing protein | DUE52_27895 | Not Available | Negative | 6940349 - 6940846 | 18893.7 |
| mate family efflux transporter | DUE52_27900 | Not Available | Negative | 6940857 - 6942239 | 49826.3 |
| duf4290 domain-containing protein | DUE52_27905 | Not Available | Positive | 6942361 - 6943137 | 29787.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DUE52_27910 | Not Available | Positive | 6943242 - 6944549 | 47561.0 |
| hypothetical protein | DUE52_27915 | Not Available | Positive | 6944753 - 6944950 | 7684.08 |
| hypothetical protein | DUE52_27920 | Not Available | Positive | 6945105 - 6945398 | 11274.6 |
| ribonuclease h | DUE52_27925 | Not Available | Positive | 6945562 - 6946194 | 23828.1 |
| methyltransferase domain-containing protein | DUE52_27930 | Not Available | Positive | 6946305 - 6947003 | 26260.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
