Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ta family plp-dependent enzyme | DUE52_27835 | Not Available | Negative | 6925709 - 6926818 | 41475.7 |
| rida family protein | DUE52_27840 | Not Available | Negative | 6927037 - 6927501 | 16597.4 |
| gluconate transporter | DUE52_27845 | Not Available | Negative | 6927697 - 6929016 | 45956.5 |
| restriction endonuclease | DUE52_27850 | Not Available | Negative | 6929122 - 6930390 | 48397.4 |
| meta domain-containing protein | DUE52_27855 | Not Available | Negative | 6930400 - 6931299 | 33161.7 |
| gfo/idh/moca family oxidoreductase | DUE52_27860 | Not Available | Negative | 6931320 - 6932402 | 39711.0 |
| hypothetical protein | DUE52_27865 | Not Available | Positive | 6932483 - 6932911 | 16037.2 |
| galactitol-1-phosphate 5-dehydrogenase | DUE52_27870 | Not Available | Negative | 6933332 - 6934363 | 36605.4 |
| aaa family atpase | DUE52_27875 | Not Available | Negative | 6934459 - 6936042 | 60574.6 |
| hypothetical protein | DUE52_27880 | Not Available | Positive | 6936046 - 6937017 | 36777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
