Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_27785 | Not Available | Negative | 6917916 - 6918968 | 39825.6 |
| dde transposase | DUE52_27790 | Not Available | Negative | 6919005 - 6919197 | 7476.77 |
| hnh endonuclease | DUE52_27795 | Not Available | Positive | 6919543 - 6920253 | 27658.5 |
| hypothetical protein | DUE52_27800 | Not Available | Positive | 6920421 - 6920810 | 15132.1 |
| carbon-nitrogen hydrolase family protein | DUE52_27805 | Not Available | Positive | 6920834 - 6921544 | 25567.5 |
| duf2183 domain-containing protein | DUE52_27810 | Not Available | Negative | 6921568 - 6922617 | 40131.3 |
| diacylglycerol kinase family lipid kinase | DUE52_27815 | Not Available | Positive | 6922796 - 6923692 | 32973.5 |
| hypothetical protein | DUE52_27820 | Not Available | Positive | 6923964 - 6924326 | 13612.4 |
| hypothetical protein | DUE52_27825 | Not Available | Negative | 6924550 - 6924999 | 17204.8 |
| g-d-s-l family lipolytic protein | DUE52_27830 | Not Available | Negative | 6925002 - 6925670 | 24810.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
